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Staying Compliant: A Nonprofit’s Guide to IRS and Grant Accounting Standards

Mar 19

3 min read

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As a nonprofit leader, your mission to create a positive impact on your community or cause is the driving force behind your work. However, ensuring your organization remains in good standing with donors, funders, and the IRS is just as crucial. Failure to stay compliant with nonprofit accounting standards can lead to serious consequences, including the loss of tax-exempt status or ineligibility for future grants. This guide covers essential IRS regulations, grant accounting standards, and practical tips to ensure your nonprofit remains compliant.


Understanding IRS Regulations for Nonprofit Organizations


Nonprofit organizations are subject to a unique set of rules established by the IRS, particularly under Section 501(c)(3) of the Internal Revenue Code. While tax-exempt status is a significant benefit, it comes with specific accounting obligations. Here are key areas where nonprofits must remain compliant:



  1. Accurate Recordkeeping for Nonprofits

The IRS mandates that nonprofits maintain detailed financial records, including income, expenses, and donations. Good recordkeeping ensures tax compliance and fosters transparency with stakeholders. Key records to track include:


  • Donor Contributions

  • Grants and Funding Sources

  • Salaries, Benefits, and Expenses

  • Assets and Liabilities


  1. Filing Annual IRS Forms (Form 990)

Nonprofits must file an annual return with the IRS, commonly known as Form 990. This form provides a comprehensive overview of your nonprofit’s financial activities. The specific form you file depends on your organization’s annual revenue and amount of assets:


Form Type

Gross Receipts

Total Assets

Form 990

Over $200K

Over $500K

Form 990-EZ

Under $200K

Under $500K

Form 990-N (e-postcard)

Under $50K

N/A


  1. Proper Classification of Employees and Contractors

Ensure that your nonprofit correctly classifies individuals as employees or independent contractors. Misclassification can lead to tax issues, including incorrect payroll tax withholding. Proper classification is essential for compliance.


  1. Unrelated Business Income Tax (UBIT)

If your nonprofit generates income from activities unrelated to its exempt purpose, it may be subject to Unrelated Business Income Tax (UBIT). The IRS requires nonprofits to pay taxes on non-charitable income, such as revenue from a gift shop or paid events.


  1. Donor Restrictions Compliance

If your nonprofit receives restricted donations, you must track and use the funds as directed by the donor. Failing to comply with donor restrictions can jeopardize your nonprofit's status.


Adhering to Grant Accounting Standards


Compliance with grant accounting standards is critical to ensuring responsible fund management and accountability to funders. Whether your nonprofit receives government grants, foundation grants, or corporate sponsorships, it’s essential to follow the guidelines for proper fund allocation and reporting.



Nonprofit personnel doing grant accounting by hand ledger.
Nonprofit leaders need to ensure their organization follows more complex accounting standards, especially when grants are involved.

  1. Grant Budgets and Reporting

Each grant comes with a specified budget detailing how funds should be spent. Ensuring strict adherence to this budget and providing regular reports—such as progress updates and financial statements—is necessary for continued funding.


  1. Cost Allocation for Grants

Proper cost allocation is vital for maintaining grant compliance. Direct costs (e.g., staff salaries) and indirect costs (e.g., office rent) must be tracked separately and in accordance with grant terms. Funders may impose restrictions on administrative costs or require documentation for indirect expenses.


  1. Audit Trails and Grant Audits

Many grantors require an audit or independent review. To prepare for audits, maintain a clear and organized audit trail, including records of all financial transactions, invoices, receipts, and supporting documents.


  1. Tracking Funds Received vs. Funds Expended

Grantors want assurance that funds are being used as intended. Nonprofits must track the funds they receive and compare them to actual expenditures to ensure compliance with the grant’s terms. Address any discrepancies promptly.


Best Practices for Nonprofit Accounting Compliance


To avoid mistakes and maintain compliance with IRS regulations and grant accounting standards, follow these best practices:


  • Implement a Robust Accounting System: Set up an accounting system that allows you to track donations, grants, expenses, and assets in real-time. This can be done with a nonprofit specific accounting system, or setting up and using your accounting system correctly.

  • Train Your Team: Ensure your finance and program staff are trained on nonprofit accounting requirements, both for IRS reporting and grant compliance.

  • Segregate Restricted Funds: Create separate accounts for donations with restrictions to ensure funds are used according to donor intentions.

  • Consult Professionals: If you’re unsure about specific tax or accounting requirements, consult a nonprofit accountant or financial advisor for guidance.


Conclusion: Ensuring IRS and Grant Compliance for Nonprofits

Staying compliant with IRS regulations and grant accounting standards is crucial for maintaining your nonprofit's tax-exempt status and eligibility for funding. By keeping accurate records, adhering to grant terms, and staying updated on regulatory changes, your organization can continue to focus on fulfilling its mission while maintaining transparency and accountability.


By following these guidelines and maintaining strong financial practices, your nonprofit can ensure long-term success and continue making a meaningful impact.


Struggling with nonprofit compliance? Contact Pathfinder Accounting & Tax today for expert accounting services tailored to your mission-driven organization.

Mar 19

3 min read

0

4

0

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